CDS

Accession Number TCMCG007C60043
gbkey CDS
Protein Id XP_033138997.1
Location complement(join(46180..46317,46392..46598,46683..46926,47028..47230,47326..47411,47499..47655,47741..47905,48014..48187))
Gene LOC117129893
GeneID 117129893
Organism Brassica rapa

Protein

Length 457aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033283106.1
Definition vacuolar-processing enzyme delta-isozyme-like [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category O
Description Peptidase C13 family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01002        [VIEW IN KEGG]
KEGG_ko ko:K01369        [VIEW IN KEGG]
EC 3.4.22.34        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04142        [VIEW IN KEGG]
ko04612        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
map04612        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000322        [VIEW IN EMBL-EBI]
GO:0000325        [VIEW IN EMBL-EBI]
GO:0000326        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004175        [VIEW IN EMBL-EBI]
GO:0004197        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005615        [VIEW IN EMBL-EBI]
GO:0005618        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006624        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008219        [VIEW IN EMBL-EBI]
GO:0008233        [VIEW IN EMBL-EBI]
GO:0008234        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009505        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010214        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0012501        [VIEW IN EMBL-EBI]
GO:0016485        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0030312        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044421        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051604        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0070011        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTTTTCTTGGCCATTTTCAAATTTTTCTTTTTCTTTATGCTTTGCTTCTTCTCTCAGCACAATCTCGCAAAACCGAACATGATACAGAATCTAGTGACGATGGTGCAGAAGGACAACGATGGGCGGTTCTAGTGGCTGGTTCTAAAGAATATGAAAACTATAGGCATCAGGCTGACATATGCCATGCGTATCAGATACTGCGTAAAGGAGGTCTAAAAGATGAAAACATAATAGTGTTTATGTTTGATGACATTGCCTTAAATCCTAAGAATCCCAAGCGTGGAGTAATCATTAACAGACCCGGGGGAGAGGATGTTTATCAAGGAGTTCCTAAGGACTACACGGGAGAAGCTGTGAATGTAGAGAACTTTTTAAATGTGATACTTGGAAACAAGAGTGGCGTCACAGGAGGAAGTGGAAAAGTTGTGAAAAGTGGTCCGAATGACAATATATTCATCTACTATGCTGACCATGGAGCTACAGGATTTATATCGATGCCCACTGGTGAAGCACTCTATGCAGAAGATTTCATCAAAGTCTTGGAGAGGATGCACTTGCTAAAAAGATACAAGAAGATGGTGATATATATTGAAGCTTGTGAATCTGGAAGCATGTTTGAAGGGCTGTTAAAGACAAATCTCAATATATACGCAGTTACTGCTTCTAATGCAAAAGATAGCAGCTATGGCATCTACTGTGGTGATACATATCCTCCTTCTCCTCCTGAGTATAATGGTCTTTGTCTCGGCGACGAATTTAGTGTCTCTTGGCTTGAGGACAGCGAACTTCATGACATGAGAAAAGAGACTTTGAAGCAGCAATACCAAGTTGTAAAGAGAAGAACAAGATCTTCTCATGTCTGCCGTTTTGGATCAGAGGAGCTTCTTAAAGACTATCTCGTCTCTTACATTGGAACCAATCCTGAAAACAAAAACTTCAGTCTAGCTTCATTGACTGCCTCACAAATCTCTAACCTAAGCTTGGTCAATACACGTGAGATACCTCTGTTATATCTCCAGAAGAAGATTCAAAACGCTCCTGTGGGGTCACCTGAAAGACAAGAAGCTCAGAAGAATCTGCTTGACGAAATGAATCATAGGAAACAAATCGATCAGAACATTATAGAGATTCTGAGAGTTTCACTTAACCAAACCAATGTCCTAGATCTCTTGACTTCCACAAGAACAACAGGACAATCTCTTGTAGATGATTGGGACTGTTTCAAGACTCTGGTTAAGAGTTTCAAGAATCAGTGTGGAGCAAAGATGGAATACGGTATGAAGTATGCAGGAGCACTTGCAAATATTTGCAATATGGGAGTCGATGTGAAGCAACATGTATCAGCTATTGAACAAGCTTGTGCCCATTAA
Protein:  
MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNAPVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMKYAGALANICNMGVDVKQHVSAIEQACAH